BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020E03LP1|AL427627
(343 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 425 e-119
3x_Contig1088 119 3e-27
3x_Contig582 119 3e-27
3x_Contig1747 117 1e-26
3x_Contig1718 117 1e-26
3x_Contig1204 117 1e-26
3x_Contig727 117 1e-26
3x_Contig631 117 1e-26
>3x_Contig1376
Length = 7449
Score = 425 bits (210), Expect = e-119
Identities = 234/245 (95%)
Strand = Plus / Plus
Query: 1 tgactcgnattcgttgccttgttaaaacaaagaagccgtgaatagtagtgtcgagttttg 60
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6238 tgactcgtattcgttgccttgttaaaacatagaagccgtgaatagtagtgtcgagttttg 6297
Query: 61 agtcaacaagcagatggtcgatctagaagaaaaawwaaagggcaggagggggcagagtta 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6298 agtcaacaagcagatggtcgatctagaagaaaaattaaagggcaggagggggcagagtta 6357
Query: 121 tgtacccatagttggagtcaggtagacttatctgctctaaaagaagaaaratgtccgcga 180
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 6358 tgtacccatagttggagtcaggtagacttatctgctctaaaagtagaaagttgtccgcga 6417
Query: 181 tagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanaccccgncg 240
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 6418 tagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattccccgtcg 6477
Query: 241 cggag 245
|||||
Sbjct: 6478 cggag 6482
Score = 109 bits (54), Expect = 3e-24
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 284 tcctacaggtaaaggtcacaacgcgagtatgcyagaattaacgatgagttgtgtgtgaac 343
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6521 tccttcaggtaaaggtcacaacgcgagtatgctagaattaacgatgagttgtgtgtgaac 6580
>3x_Contig1088
Length = 4585
Score = 119 bits (59), Expect = 3e-27
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 173 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaana 232
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1439 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1498
Query: 233 ccccgncgcggag 245
||||| |||||||
Sbjct: 1499 ccccgtcgcggag 1511
>3x_Contig582
Length = 2827
Score = 119 bits (59), Expect = 3e-27
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 173 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaana 232
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1713 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 1772
Query: 233 ccccgncgcggag 245
||||| |||||||
Sbjct: 1773 ccccgtcgcggag 1785
>3x_Contig1747
Length = 15671
Score = 117 bits (58), Expect = 1e-26
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 174 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanac 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 2462 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 2403
Query: 234 cccgncgcggag 245
|||| |||||||
Sbjct: 2402 cccgtcgcggag 2391
>3x_Contig1718
Length = 19496
Score = 117 bits (58), Expect = 1e-26
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 174 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanac 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 4332 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 4273
Query: 234 cccgncgcggag 245
|||| |||||||
Sbjct: 4272 cccgtcgcggag 4261
>3x_Contig1204
Length = 5869
Score = 117 bits (58), Expect = 1e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 174 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanac 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 5718 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 5777
Query: 234 cccgncgcggag 245
|||| |||||||
Sbjct: 5778 cccgtcgcggag 5789
>3x_Contig727
Length = 2486
Score = 117 bits (58), Expect = 1e-26
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 174 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanac 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 1173 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1114
Query: 234 cccgncgcggag 245
|||| |||||||
Sbjct: 1113 cccgtcgcggag 1102
>3x_Contig631
Length = 2339
Score = 117 bits (58), Expect = 1e-26
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 174 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagaccggggttcaanac 233
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 1080 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1021
Query: 234 cccgncgcggag 245
|||| |||||||
Sbjct: 1020 cccgtcgcggag 1009
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8286
Number of Sequences: 1807
Number of extensions: 8286
Number of successful extensions: 210
Number of sequences better than 1.0e-20: 8
length of query: 343
length of database: 10,358,551
effective HSP length: 15
effective length of query: 328
effective length of database: 10,331,446
effective search space: 3388714288
effective search space used: 3388714288
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)